Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015953068.1_cds_XP_016492389.1_82607
CDS Infomation

[gene=LOC107811911] [db_xref=GeneID:107811911] [protein=probable WRKY transcription factor 33] [protein_id=XP_016492389.1] [location=complement(join(17861..18275,18364..18525,18604..19172,19259..19432,19506..19958))] [gbkey=CDS]
Sequence

ATGGAAAAGCAGCATAGCGCCTTGCAGAATACGTGTTCATTTTTCCTTTTAATTTCTCAT
CCACTCCCACAAAGTCAAGACCATCATATAATCCAATCCTCATTCCTCTCTCTCTTTCTT
CTAATAAAACCAATAATGGCAGCTTCCTCAACAATCATAGACACATCATCTATGCAGAAT
TCAAGTTTCTCTTTTCCAACTTCATCTTCTTCATTCATGACTTCTTCATTCACTGAACTT
CTTGCTTCTGATGATTATCCAACAAAGAGCAAAGGACTTGGTGATAGGATTGCAGAGAGA
ACTGGTTCTGGAGTTCCCAAGTTTAAGTCACTTCCACCTCCTTCACTACCCCTTTCTCCT
CCTCCTTTTTCTCCTTCCTCTTACTTTGCTATTCCTCCTGGCTTAAGCCCTACTGAACTC
TTGGACTCTCCTGTTCTTTTGTCTGCTTCCAACATTCTTCCATCTCCAACAACAGGGACA
TTTCCAGCTCAGGCTTTTAACTGGAAGAGCAGCCGCCATCAGGGTGTCAAACAGGAAGAC
AAAAACTACTCTGATTTCTCTTTCCAGCCCCAATTTGGACAATCTTTTCCATCAGTCTCT
CCGTCCCAAACTAATCTTGTCCCTTTGAAGAAACAATCATGGAATTATCAAGAATCAAGA
AATCAGAATGATCAATCATCTGAAAATGCTAATGGAAGAACTGAATTCAACACTATGCAG
AGCTTGAAAAATAATGGTCAGAGCAACCAATATAACAACCAATCATCACAGAGTATAAGG
GAGCAGAAAAGATCAGAAGATGGGTACAATTGGAGGAAATATGGGCAGAAACAAGTGAAG
GGTAGTGAAAATCCAAGAAGTTACTATAAATGTACTTTCCCAAATTGTCCCACAAAGAAA
AAAGTAGAGAGGTCTTTAGATGGACAAATTACTGAAATTGTGTACAAGGGTAATCACAAC
CATCCAAAGCCTCAGTCTACTAGGAGATCCTCATCCACAGCTTCCTCTTTAACCGTCCAA
CCTTACAGTACACAAACTAATGAAATCCCAGATCATCAGTCATATGGTTCAAATGCAACA
CCTGAGAATTCTTCCATTTCATTTGGTGATGATGATCATGATCATGAGCAAAGCTCTCAA
AAGAGTAGGTCAAGAGGAGATGATAATGAAGAAGAAGAACCAGACTCAAAAAGATGGAAA
AGAGAAAGCGAAAGTGAAGGTTTATCAGCACCAGGAAGCAGAACAGTAAGAGAACCTAGA
GTTGTAGTTCAAACAACAAGTGATATTGATATTCTAGATGATGGTTATAGATGGAGGAAG
TATGGTCAAAAAGTAGTGAAAGGAAATCCTAATCCAAGGAGCTACTACAAATGCACAAGT
CCAGGATGTCCAGTAAGAAAACATGTGGAACGAGCATCACAAGATATAAGATCAGTGATA
ACAACTTATGAAGGAAAACACAACCATGATGTTCCAGCAGCTAGGGGCAGTGGCATAAAC
CGACCTGTCGCACCAAACATTACTTACAACAATGGTGCCAATGCCATGGCCATAAGGCCT
TCTGTCACATCTCAAATTCCATTGCAAAGTATAAGGCCACAACAATCTCCCTTTACACTA
GAGATGTTGCACAAGCCTAGTAATTATAATGGTTTCTCAGGATATGTAAATTCAGAGGAT
TCATATGAAAACCAACTTCAGGACAATAATGTATTTTCCAGAGCAAAGGACGAGCCTCGA
GATGACATGTTTATGGAGACATTGCTCTGCTGA

Peptide Sequence

PEP ID

XP_016492389.1
PEP Infomation

PREDICTED: probable WRKY transcription factor 33 [Nicotiana tabacum]
Sequence

MEKQHSALQNTCSFFLLISHPLPQSQDHHIIQSSFLSLFLLIKPIMAASSTIIDTSSMQN
SSFSFPTSSSSFMTSSFTELLASDDYPTKSKGLGDRIAERTGSGVPKFKSLPPPSLPLSP
PPFSPSSYFAIPPGLSPTELLDSPVLLSASNILPSPTTGTFPAQAFNWKSSRHQGVKQED
KNYSDFSFQPQFGQSFPSVSPSQTNLVPLKKQSWNYQESRNQNDQSSENANGRTEFNTMQ
SLKNNGQSNQYNNQSSQSIREQKRSEDGYNWRKYGQKQVKGSENPRSYYKCTFPNCPTKK
KVERSLDGQITEIVYKGNHNHPKPQSTRRSSSTASSLTVQPYSTQTNEIPDHQSYGSNAT
PENSSISFGDDDHDHEQSSQKSRSRGDDNEEEEPDSKRWKRESESEGLSAPGSRTVREPR
VVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTSPGCPVRKHVERASQDIRSVI
TTYEGKHNHDVPAARGSGINRPVAPNITYNNGANAMAIRPSVTSQIPLQSIRPQQSPFTL
EMLHKPSNYNGFSGYVNSEDSYENQLQDNNVFSRAKDEPRDDMFMETLLC

Transcript Sequence

Gene sequence data has not been registered.